Repository: https://pub.amphibase.org/draft/Anura/Bombina_maxima/

2021_07 release: 17,985 sequences

Transcripts

  • Mean Tx length(bp): 1,209
  • Median Tx length(bp): 868
  • Tx longer than 400bp: 13,494 (75.029)
  • Tx longer than 1kbp: 8,031 (44.654)
  • Tx longer than 5kbp: 249
  • Tx longer than 10kbp: 15

Peptides

  • Mean pep length(aa): 316
  • Median pep length(aa): 220
  • Peptides longer than 100aa: 14,240 (79.177)
  • Peptides longer than 500aa: 3,189 (17.731)
  • Peptides longer than 1000aa: 654
  • Peptides longer than 3000aa: 13

BUSCO

  • Vertebrates: C:53.1%[S:50.7%,D:2.4%],F:22.8%,M:24.1%,n:3354
    • 1782 Complete BUSCOs (C)
    • 1701 Complete and single-copy BUSCOs (S)
    • 81 Complete and duplicated BUSCOs (D)
    • 765 Fragmented BUSCOs (F)
    • 807 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links