Repository: https://pub.amphibase.org/draft/Anura/Bombina_orientalis/

2021_07 release: 26,136 sequences

Transcripts

  • Mean Tx length(bp): 1,397
  • Median Tx length(bp): 1,045
  • Tx longer than 400bp: 20,210 (77.326)
  • Tx longer than 1kbp: 13,451 (51.465)
  • Tx longer than 5kbp: 527
  • Tx longer than 10kbp: 26

Peptides

  • Mean pep length(aa): 355
  • Median pep length(aa): 249
  • Peptides longer than 100aa: 21,075 (80.636)
  • Peptides longer than 500aa: 5,875 (22.479)
  • Peptides longer than 1000aa: 1,357
  • Peptides longer than 3000aa: 23

BUSCO

  • Vertebrates: C:85.5%[S:81.8%,D:3.7%],F:6.6%,M:7.9%,n:3354
    • 2868 Complete BUSCOs (C)

    • 2745 Complete and single-copy BUSCOs (S)

    • 123 Complete and duplicated BUSCOs (D)

    • 220 Fragmented BUSCOs (F)

    • 266 Missing BUSCOs (M)

    • 3354 Total BUSCO groups searched

External Links