Repository: https://pub.amphibase.org/draft/Anura/Bombina_variegata/

2021_07 release: 16,361 sequences

Transcripts

  • Mean Tx length(bp): 2,092
  • Median Tx length(bp): 1,689
  • Tx longer than 400bp: 15,122 (92.484)
  • Tx longer than 1kbp: 11,612 (71.017)
  • Tx longer than 5kbp: 985
  • Tx longer than 10kbp: 67

Peptides

  • Mean pep length(aa): 456
  • Median pep length(aa): 341
  • Peptides longer than 100aa: 15,552 (95.113)
  • Peptides longer than 500aa: 5,094 (31.154)
  • Peptides longer than 1000aa: 1,348
  • Peptides longer than 3000aa: 49

BUSCO

  • Vertebrates: C:81.1%[S:77.8%,D:3.3%],F:7.3%,M:11.6%,n:3354
    • 2722 Complete BUSCOs (C)
    • 2611 Complete and single-copy BUSCOs (S)
    • 111 Complete and duplicated BUSCOs (D)
    • 245 Fragmented BUSCOs (F)
    • 387 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links