Repository: https://pub.amphibase.org/draft/Anura/Engystomops_pustulosus/

2021_07 release: 23,490 sequences

Transcripts

  • Mean Tx length(bp): 1,787
  • Median Tx length(bp): 1,277
  • Tx longer than 400bp: 19,689 (83.819)
  • Tx longer than 1kbp: 13,656 (58.135)
  • Tx longer than 5kbp: 1,232
  • Tx longer than 10kbp: 107

Peptides

  • Mean pep length(aa): 414
  • Median pep length(aa): 286
  • Peptides longer than 100aa: 20,239 (86.160)
  • Peptides longer than 500aa: 6,244 (26.582)
  • Peptides longer than 1000aa: 1719
  • Peptides longer than 3000aa: 81

BUSCO

  • Vertebrates: C:79.9%[S:76.2%,D:3.7%],F:9.4%,M:10.7%,n:3354
    • 2681 Complete BUSCOs (C)
    • 2556 Complete and single-copy BUSCOs (S)
    • 125 Complete and duplicated BUSCOs (D)
    • 315 Fragmented BUSCOs (F)
    • 358 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links