Repository: https://pub.amphibase.org/draft/Anura/Fejervarya_cancrivora/

2021_07 release: 18,778 sequences

Transcripts

  • Mean Tx length(bp): 2,001
  • Median Tx length(bp): 1,476
  • Tx longer than 400bp: 16,853 (89.749)
  • Tx longer than 1kbp: 12,200 (64.970)
  • Tx longer than 5kbp: 1,345
  • Tx longer than 10kbp: 51

Peptides

  • Mean pep length(aa): 407
  • Median pep length(aa): 311
  • Peptides longer than 100aa: 17,307 (92.166)
  • Peptides longer than 500aa: 5,124 (27.287)
  • Peptides longer than 1000aa: 1,174
  • Peptides longer than 3000aa: 8

BUSCO

  • Vertebrates: C:76.9%[S:73.7%,D:3.2%],F:10.7%,M:12.4%,n:3354
    • 2580 Complete BUSCOs (C)
    • 2472 Complete and single-copy BUSCOs (S)
    • 108 Complete and duplicated BUSCOs (D)
    • 360 Fragmented BUSCOs (F)
    • 414 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links