Repository: https://pub.amphibase.org/draft/Anura/Fejervarya_limnocharis/

2021_07 release: 18,088 sequences

Transcripts

  • Mean Tx length(bp): 1,750
  • Median Tx length(bp): 1,350
  • Tx longer than 400bp: 16,358 (90.436)
  • Tx longer than 1kbp: 11,144 (61.610)
  • Tx longer than 5kbp: 734
  • Tx longer than 10kbp: 20

Peptides

  • Mean pep length(aa): 390
  • Median pep length(aa): 292
  • Peptides longer than 100aa: 16,703 (92.343)
  • Peptides longer than 500aa: 4,509 (24.928)
  • Peptides longer than 1000aa: 1,036
  • Peptides longer than 3000aa: 12

BUSCO

  • Vertebrates: C:70.9%[S:67.4%,D:3.5%],F:12.1%,M:17.0%,n:3354
    • 2376 Complete BUSCOs (C)
    • 2259 Complete and single-copy BUSCOs (S)
    • 117 Complete and duplicated BUSCOs (D)
    • 407 Fragmented BUSCOs (F)
    • 571 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links