Repository: https://pub.amphibase.org/draft/Anura/Glandirana_rugosa/

2021_07 release: 21,414 sequences

Transcripts

  • Mean Tx length(bp): 2,041
  • Median Tx length(bp): 1,528
  • Tx longer than 400bp: 19,288 (90.072)
  • Tx longer than 1kbp: 13,992 (65.340)
  • Tx longer than 5kbp: 1,515
  • Tx longer than 10kbp: 63

Peptides

  • Mean pep length(aa): 425
  • Median pep length(aa): 310
  • Peptides longer than 100aa: 20,127 (93.990)
  • Peptides longer than 500aa: 6,045 (28.229)
  • Peptides longer than 1000aa: 1,603
  • Peptides longer than 3000aa: 25

BUSCO

  • Vertebrates: C:89.2%[S:85.2%,D:4.0%],F:4.0%,M:6.8%,n:3354
    • 2992 Complete BUSCOs (C)
    • 2859 Complete and single-copy BUSCOs (S)
    • 133 Complete and duplicated BUSCOs (D)
    • 135 Fragmented BUSCOs (F)
    • 227 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links