Repository: https://pub.amphibase.org/draft/Anura/Hoplobatrachus_rugulosus/

2021_07 release: 17,722 sequences

Transcripts

  • Mean Tx length(bp): 2,443
  • Median Tx length(bp): 1,899
  • Tx longer than 400bp: 16,829 (94.961)
  • Tx longer than 1kbp: 13,233 (74.670)
  • Tx longer than 5kbp: 1,885
  • Tx longer than 10kbp: 65

Peptides

  • Mean pep length(aa): 453
  • Median pep length(aa): 355
  • Peptides longer than 100aa: 16,823 (94.927)
  • Peptides longer than 500aa: 5,693 (32.124)
  • Peptides longer than 1000aa: 1,382
  • Peptides longer than 3000aa: 5

BUSCO

  • Vertebrates: C:82.9%[S:79.6%,D:3.3%],F:7.1%,M:10.0%,n:3354
    • 2780 Complete BUSCOs (C)
    • 2670 Complete and single-copy BUSCOs (S)
    • 110 Complete and duplicated BUSCOs (D)
    • 238 Fragmented BUSCOs (F)
    • 336 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links