Repository: https://pub.amphibase.org/draft/Anura/Hyla_suweonensis/

2021_07 release: 22,929 sequences

Transcripts

  • Mean tx length(bp): 1,926
  • Median tx length(bp): 1,530
  • Tx longer than 400bp: 20,969 (91.452)
  • Tx longer than 1kbp: 15,381 (67.081)
  • Tx longer than 5kbp: 1,096
  • Tx longer than 10kbp: 65

Peptides

  • Mean peptide length(aa): 452
  • Median peptide length(aa): 336:
  • Peptides longer than 100aa: 21,760 (94.902)
  • Peptides longer than 500aa: 7,057 (30.778)
  • Peptides longer than 1000aa: 1,881
  • Peptides longer than 3000aa: 51

BUSCO

  • Vertebrates: C:93.2%[S:89.0%,D:4.2%],F:2.5%,M:4.3%,n:3354
    • 3127 Complete BUSCOs (C)
    • 2985 Complete and single-copy BUSCOs (S)
    • 142 Complete and duplicated BUSCOs (D)
    • 83 Fragmented BUSCOs (F)
    • 144 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links