Repository: https://pub.amphibase.org/draft/Anura//

2021_07 release: 18,160 sequences

Transcripts

  • Mean length(bp): 1,839
  • Median length(bp): 1,457
  • Tx longer than 400bp: 15,784 (86.916)
  • Tx longer than 1kbp: 11,695 (64.400)
  • Tx longer than 5kbp: 815
  • Tx longer than 10kbp: 33

Peptides

  • Mean length(aa): 406
  • Median length(aa): 310
  • Peptides longer than 100aa: 15,907 (87.594)
  • Peptides longer than 500aa: 4,953 (27.274)
  • Peptides longer than 1000aa: 1,150
  • Peptides longer than 3000aa: 12

BUSCO5

  • Vertebrates: 80.8%[S:77.0%,D:3.8%],F:7.7%,M:11.5%,n:3354
    • 2710 Complete BUSCOs (C)
    • 2584 Complete and single-copy BUSCOs (S)
    • 126 Complete and duplicated BUSCOs (D)
    • 259 Fragmented BUSCOs (F)
    • 385 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links