Repository: https://pub.amphibase.org/draft/Anura/Odorrana_margaretae/

2021_07 release: 15,023 sequences

Transcripts

  • Mean Tx length(bp): 1,904
  • Median Tx length(bp): 1,594
  • Tx longer than 400bp: 13,781 (91.733)
  • Tx longer than 1kbp: 10,281 (68.435)
  • Tx longer than 5kbp: 521
  • Tx longer than 10kbp: 6

Peptides

  • Mean pep length(aa): 384
  • Median pep length(aa): 308
  • Peptides longer than 100aa: 14,336 (95.427)
  • Peptides longer than 500aa: 3,787 (25.208)
  • Peptides longer than 1000aa: 630
  • Peptides longer than 3000aa: 2

BUSCO

  • Vertebrates: C:71.1%[S:69.7%,D:1.4%],F:11.9%,M:17.0%,n:3354
    • 2385 Complete BUSCOs (C)
    • 2339 Complete and single-copy BUSCOs (S)
    • 46 Complete and duplicated BUSCOs (D)
    • 400 Fragmented BUSCOs (F)
    • 569 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links