Repository: https://pub.amphibase.org/draft/Anura/Pelophylax_chosenicus/

2021_07 release: 22,454 sequences

Transcripts

  • Mean Tx length(bp): 1,796
  • Median Tx length(bp): 1,318
  • Tx longer than 400bp: 18,413 (82.003)
  • Tx longer than 1kbp: 13,387 (59.620)
  • Tx longer than 5kbp: 1,195
  • Tx longer than 10kbp: 81

Peptides

  • Mean peptide length(aa): 395
  • Median peptide length(aa): 278
  • Peptides longer than 100aa: 18,813 (83.785)
  • Peptides longer than 500aa: 5,785 (25.764)
  • Peptides longer than 1000aa: 1,512
  • Peptides longer than 3000aa: 35

BUSCO

  • Vertebrates: C:84.9%[S:81.0%,D:3.9%],F:5.9%,M:9.2%,n:3354
    • 2848 Complete BUSCOs (C)
    • 2716 Complete and single-copy BUSCOs (S)
    • 132 Complete and duplicated BUSCOs (D)
    • 199 Fragmented BUSCOs (F)
    • 307 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links