Repository: https://pub.amphibase.org/draft/Anura/Pelophylax_lessonae/

2021_07 release: 20,322 sequences

Transcripts

  • Mean Tx length(bp): 1,081
  • Median Tx length(bp): 703
  • Tx longer than 400bp: 13,717 (67.498)
  • Tx longer than 1kbp: 7,814 (38.451)
  • Tx longer than 5kbp: 264
  • Tx longer than 10kbp: 12

Peptides

  • Number of peptides: 20322 20322
  • Mean peptide length(aa): 279
  • Median peptide length(aa): 186
  • Peptides longer than 100aa: 14,955 (73.590)
  • Peptides longer than 500aa: 2,830 (13.926)
  • Peptides longer than 1000aa: 530
  • Peptides longer than 3000aa: 9

BUSCO

  • Vertebrates: C:53.4%[S:51.3%,D:2.1%],F:21.6%,M:25.0%,n:3354
    • 1791 Complete BUSCOs (C)
    • 1719 Complete and single-copy BUSCOs (S)
    • 72 Complete and duplicated BUSCOs (D)
    • 724 Fragmented BUSCOs (F)
    • 839 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links