Repository: https://pub.amphibase.org/draft/Anura/Rana_tagoi/

2021_07 release: 16,372 sequences

Transcripts

  • Mean Tx length(bp): 1,828
  • Median Tx length(bp): 1,338
  • Tx longer than 400bp: 14,302 (87.356)
  • Tx longer than 1kbp: 10,095 (61.660)
  • Tx longer than 5kbp: 890
  • Tx longer than 10kbp: 66

Peptides

  • Mean pep length(aa): 399
  • Median pep length(aa): 290
  • Peptides longer than 100aa: 14,549 (88.865)
  • Peptides longer than 500aa: 4,093 (25.000)
  • Peptides longer than 1000aa: 972
  • Peptides longer than 3000aa: 33

BUSCO

  • Vertebrates: C:68.4%[S:65.0%,D:3.4%],F:10.7%,M:20.9%,n:3354
    • 2294 Complete BUSCOs (C)
    • 2180 Complete and single-copy BUSCOs (S)
    • 114 Complete and duplicated BUSCOs (D)
    • 358 Fragmented BUSCOs (F)
    • 702 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links