Repository: https://pub.amphibase.org/draft/Caudata/Hynobius_chinensis/

2021_07 release: 23,408 sequences

Transcripts

  • Mean Tx length(bp): 1,086
  • Median Tx length(bp): 729
  • Tx longer than 400bp: 16,142 (68.959)
  • Tx longer than 1kbp: 9,181 (39.222)
  • Tx longer than 5kbp: 230
  • Tx longer than 10kbp: 16

Peptides

  • Mean peptide length(aa): 279
  • Median peptide length(aa): 195
  • Peptides longer than 100aa: 17,449 (74.543)
  • Peptides longer than 500aa: 3,343 (14.281)
  • Peptides longer than 1000aa: 539
  • Peptides longer than 3000aa: 12

BUSCO

  • Vertebrates: C:56.7%[S:54.3%,D:2.4%],F:22.6%,M:20.7%,n:3354
    • 1901 Complete BUSCOs (C)
    • 1820 Complete and single-copy BUSCOs (S)
    • 81 Complete and duplicated BUSCOs (D)
    • 757 Fragmented BUSCOs (F)
    • 696 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links