Repository: https://pub.amphibase.org/draft/Caudata/Hynobius_quelpaertensis/

2021_07 release: 16,598 sequences

Transcripts

  • Mean Tx length(bp): 1,634
  • Median Tx length(bp): 1,159
  • Tx longer than 400bp: 14,685 (88.475)
  • Tx longer than 1kbp: 9,143 (55.085)
  • Tx longer than 5kbp: 569
  • Tx longer than 10kbp: 30

Peptides

  • Mean peptide length(aa): 348
  • Median peptide length(aa): 255
  • Peptides longer than 100aa: 15,700 (94.590)
  • Peptides longer than 500aa: 3,259 (19.635)
  • Peptides longer than 1000aa: 588
  • Peptides longer than 3000aa: 11

BUSCO

  • Vertebrates: C:63.7%[S:61.2%,D:2.5%],F:14.1%,M:22.2%,n:3354
    • 2137 Complete BUSCOs (C)
    • 2052 Complete and single-copy BUSCOs (S)
    • 85 Complete and duplicated BUSCOs (D)
    • 473 Fragmented BUSCOs (F)
    • 744 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links