Repository: https://pub.amphibase.org/draft/Caudata/Hynobius_unisacculus/

2021_07 release: 26,847 sequences

Transcripts

  • Mean Tx length(bp): 1,521
  • Median Tx length(bp): 1,021
  • Tx longer than 400bp: 21,672 (80.724)
  • Tx longer than 1kbp: 13,638 (50.799)
  • Tx longer than 5kbp: 986
  • Tx longer than 10kbp: 51

Peptides

  • Mean peptide length(aa): 339
  • Median peptide length(aa): 241
  • Peptides longer than 100aa: 23,055 (85.876)
  • Peptides longer than 500aa: 5,252 (19.563)
  • Peptides longer than 1000aa: 1,092
  • Peptides longer than 3000aa: 18

BUSCO

  • Vertebrates: C:73.9%[S:71.3%,D:2.6%],F:11.4%,M:14.7%,n:3354
    • 2478 Complete BUSCOs (C)
    • 2391 Complete and single-copy BUSCOs (S)
    • 87 Complete and duplicated BUSCOs (D)
    • 382 Fragmented BUSCOs (F)
    • 494 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links