Repository: https://pub.amphibase.org/draft/Caudata/Karsenia_koreana/

2021_07 release: 20,836 sequences

Transcripts

  • Mean Tx length(bp): 1,926
  • Median Tx length(bp): 1,494
  • Tx longer than 400bp: 18,184 (87.272)
  • Tx longer than 1kbp: 13,176 (63.237)
  • Tx longer than 5kbp: 1,139
  • Tx longer than 10kbp: 30

Peptides

  • Mean peptide length(aa): 385
  • Median peptide length(aa): 288
  • Peptides longer than 100aa: 18,485 (88.717)
  • Peptides longer than 500aa: 5,288 (25.379)
  • Peptides longer than 1000aa: 1,154
  • Peptides longer than 3000aa: 7

BUSCO

  • Vertebrates: C:82.8%[S:79.4%,D:3.4%],F:7.0%,M:10.2%,n:3354
    • 2777 Complete BUSCOs (C)
    • 2663 Complete and single-copy BUSCOs (S)
    • 114 Complete and duplicated BUSCOs (D)
    • 234 Fragmented BUSCOs (F)
    • 343 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links