Repository: https://pub.amphibase.org/draft/Caudata/Onychodactylus_koreanus/

2021_07 release: 20,758 sequences

Transcripts

  • Mean Tx length(bp): 1,552
  • Median Tx length(bp): 1,128
  • Tx longer than 400bp: 16,609 (80.013)
  • Tx longer than 1kbp: 11,223 (54.066)
  • Tx longer than 5kbp: 724
  • Tx longer than 10kbp: 38

Peptides

  • Mean peptide length(aa): 342
  • Median peptide length(aa): 251
  • Peptides longer than 100aa: 17,248 (83.091)
  • Peptides longer than 500aa: 4,176 (20.118)
  • Peptides longer than 1000aa: 800
  • Peptides longer than 3000aa: 18

BUSCO

  • Vertebrates: C:69.1%[S:66.2%,D:2.9%],F:10.9%,M:20.0%,n:3354
    • 2315 Complete BUSCOs (C)
    • 2219 Complete and single-copy BUSCOs (S)
    • 96 Complete and duplicated BUSCOs (D)
    • 365 Fragmented BUSCOs (F)
    • 674 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links