Repository: https://pub.amphibase.org/draft/Gymnophiona/Ichthyophis_bannanicus/

2021_07 release: 20,325 sequences

Transcripts

  • Mean tx length(bp): 1,523
  • Median tx length(bp): 1,146
  • Tx longer than 400bp: 16,406 (80.718)
  • Tx longer than 1kbp: 11,099 (54.608)
  • Tx longer than 5kbp: 488
  • Tx longer than 10kbp: 9

Peptides

  • Mean peptide length(aa): 331
  • Median peptide length(aa): 246
  • Peptides longer than 100aa: 17,083 (84.049)
  • Peptides longer than 500aa: 4,045 (19.902)
  • Peptides longer than 1000aa: 675
  • Peptides longer than 3000aa: 3

BUSCO

  • Vertebrates: C:65.3%[S:62.7%,D:2.6%],F:16.2%,M:18.5%,n:3354
    • 2192 Complete BUSCOs (C)
    • 2104 Complete and single-copy BUSCOs (S)
    • 88 Complete and duplicated BUSCOs (D)
    • 542 Fragmented BUSCOs (F)
    • 620 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links