Repository: https://pub.amphibase.org/draft/Gymnophiona/Microcaecilia_unicolor/

2021_07 release: 22,770 sequences

Transcripts

  • Mean Tx length(bp): 2,024
  • Median Tx length(bp): 1,590
  • Tx longer than 400bp: 19,429 (85.327)
  • Tx longer than 1kbp: 14,944 (65.630)
  • Tx longer than 5kbp: 1,482
  • Tx longer than 10kbp: 102

Peptides

  • Mean pep length(aa): 410
  • Median pep length(aa): 297
  • Peptides longer than 100aa: 19,583 (86.004)
  • Peptides longer than 500aa: 6,229 (27.356)
  • Peptides longer than 1000aa: 1,576
  • Peptides longer than 3000aa: 40

BUSCO

  • Vertebrates: C:88.6%[S:85.0%,D:3.6%],F:4.7%,M:6.7%,n:3354
    • 2970 Complete BUSCOs (C)
    • 2850 Complete and single-copy BUSCOs (S)
    • 120 Complete and duplicated BUSCOs (D)
    • 159 Fragmented BUSCOs (F)
    • 225 Missing BUSCOs (M)
    • 3354 Total BUSCO groups searched

External Links